LimsPulse
Chromatography

High Performance Liquid Chromatography (HPLC)

Separates the components of a liquid sample on a packed column and measures each one as it leaves. The workhorse of pharmaceutical QC for assay, impurities and dissolution.

  • Pharmaceutical
  • Biotech
  • Food & beverage
  • Environmental
  • Cosmetics
  • Chemicals
Photo of a High Performance Liquid Chromatography (HPLC)
Photo: Fernando Frick, CC0 (cropped), via Wikimedia Commons
TROUBLESHOOTING

Common problems, causes and fixes

High back-pressure
Likely causes
  • • Blocked column frit or guard column
  • • Precipitated buffer in tubing
  • • Blocked in-line filter
What to do
  • • Replace the guard column or in-line filter
  • • Back-flush the column if the supplier allows
  • • Flush the system with warm water to dissolve buffer salts
Pressure fluctuating
Likely causes
  • • Air bubble in the pump head
  • • Faulty or dirty check valve
  • • Leaking pump seal
What to do
  • • Degas mobile phase and purge the pump
  • • Sonicate or replace check valves
  • • Replace pump seals
Retention time shifting
Likely causes
  • • Change in mobile-phase composition or pH
  • • Column temperature not controlled
  • • Flow rate error or leak
  • • Column not equilibrated
What to do
  • • Prepare fresh mobile phase exactly as per the method
  • • Use the column oven
  • • Check for leaks and verify flow rate
  • • Equilibrate for longer
Baseline drift or noise
Likely causes
  • • Contaminated mobile phase
  • • Lamp near end of life
  • • Air in the detector cell
  • • Room temperature changes
What to do
  • • Use fresh HPLC-grade solvents
  • • Check lamp energy and replace if low
  • • Flush the flow cell
  • • Keep the instrument away from draughts and direct sunlight
Peak tailing
Likely causes
  • • Column degradation or void
  • • Secondary interactions with silanol groups
  • • Mobile-phase pH close to analyte pKa
What to do
  • • Replace the column
  • • Use an end-capped column or adjust buffer
  • • Adjust pH as permitted by the method
Ghost / extra peaks
Likely causes
  • • Carry-over from a previous injection
  • • Contaminated diluent or vials
  • • Late-eluting peaks from an earlier run
What to do
  • • Increase needle wash; run blanks
  • • Use fresh diluent and clean vials
  • • Extend run time or add a wash step
No peaks
Likely causes
  • • Lamp off or failed
  • • Injection did not happen (empty vial, needle blocked)
  • • Wrong wavelength
What to do
  • • Check lamp status
  • • Check vial volume and needle
  • • Verify method settings
In LimsPulse · Calibration Management

Keep every HPLC in control: usage logs, calibration and maintenance schedules, and automatic blocking of overdue instruments.

See how